Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1bQ8BH88 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1bQ8BH88 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1bQ8BH88 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Depdc1bQ8BH88 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.94■□□□□ 0.62
Depdc1bQ8BH88 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1bQ8BH88 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1bQ8BH88 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Gm29791-202ENSMUST00000207888 369 ntBASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1bQ8BH88 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Gm715-201ENSMUST00000117865 831 ntBASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1bQ8BH88 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms