Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim23Q8BGX0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Gm8969-201ENSMUST00000199694 526 ntBASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim23Q8BGX0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Gm15565-201ENSMUST00000118890 427 ntBASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim23Q8BGX0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim23Q8BGX0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim23Q8BGX0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim23Q8BGX0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim23Q8BGX0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim23Q8BGX0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim23Q8BGX0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms