Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Fst-202ENSMUST00000223640 2612 ntBASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npas4Q8BGD7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Mir3081-201ENSMUST00000175305 84 ntBASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Gm27357-201ENSMUST00000183754 135 ntBASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Npas4Q8BGD7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Mir770-201ENSMUST00000103252 94 ntBASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npas4Q8BGD7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npas4Q8BGD7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Npas4Q8BGD7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Gm27742-201ENSMUST00000184667 60 ntBASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npas4Q8BGD7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Gm7461-201ENSMUST00000058918 827 ntBASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms