Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.34■□□□□ 0.37
Skida1Q80YR3 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.34■□□□□ 0.37
Skida1Q80YR3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 AC154245.1-201ENSMUST00000224615 601 ntBASIC17.34■□□□□ 0.37
Skida1Q80YR3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Skida1Q80YR3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Skida1Q80YR3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Skida1Q80YR3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.33■□□□□ 0.37
Skida1Q80YR3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Skida1Q80YR3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Skida1Q80YR3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Skida1Q80YR3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
Skida1Q80YR3 AC134439.1-201ENSMUST00000220923 600 ntBASIC17.33■□□□□ 0.36
Skida1Q80YR3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Skida1Q80YR3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.32■□□□□ 0.36
Skida1Q80YR3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.32■□□□□ 0.36
Skida1Q80YR3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.32■□□□□ 0.36
Skida1Q80YR3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gm12601-201ENSMUST00000118994 846 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.31■□□□□ 0.36
Skida1Q80YR3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Skida1Q80YR3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Skida1Q80YR3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Skida1Q80YR3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms