Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk3bQ80YF6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk3bQ80YF6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Upk3bQ80YF6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upk3bQ80YF6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.75□□□□□ -0.05
Upk3bQ80YF6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Mir8112-201ENSMUST00000184382 131 ntBASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk3bQ80YF6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Gm38285-201ENSMUST00000192928 922 ntBASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upk3bQ80YF6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Upk3bQ80YF6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms