Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pif1Q80SX8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.03■□□□□ 0.16
Pif1Q80SX8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Gm14859-201ENSMUST00000117752 357 ntBASIC16.03■□□□□ 0.16
Pif1Q80SX8 Gm16061-201ENSMUST00000122167 857 ntBASIC16.03■□□□□ 0.16
Pif1Q80SX8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.03■□□□□ 0.16
Pif1Q80SX8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.03■□□□□ 0.16
Pif1Q80SX8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pif1Q80SX8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Gm7638-201ENSMUST00000121348 967 ntBASIC16.02■□□□□ 0.16
Pif1Q80SX8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Gm25016-201ENSMUST00000158399 131 ntBASIC16.02■□□□□ 0.16
Pif1Q80SX8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pif1Q80SX8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pif1Q80SX8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.02■□□□□ 0.15
Pif1Q80SX8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pif1Q80SX8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.01■□□□□ 0.15
Pif1Q80SX8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms