Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3d21Q7TSG5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3d21Q7TSG5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3d21Q7TSG5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3d21Q7TSG5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3d21Q7TSG5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Gm12382-201ENSMUST00000122005 922 ntBASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Sh3d21Q7TSG5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Gm6576-201ENSMUST00000169678 883 ntBASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Gm27011-201ENSMUST00000182352 972 ntBASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3d21Q7TSG5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Sh3d21Q7TSG5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3d21Q7TSG5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Gm8969-201ENSMUST00000199694 526 ntBASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.04■□□□□ 0.64
Sh3d21Q7TSG5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3d21Q7TSG5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms