Protein–RNA interactions for Protein: Q78PG9

Ccdc25, Coiled-coil domain-containing protein 25, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc25Q78PG9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc25Q78PG9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.27■□□□□ 0.51
Ccdc25Q78PG9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc25Q78PG9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc25Q78PG9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc25Q78PG9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc25Q78PG9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc25Q78PG9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc25Q78PG9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc25Q78PG9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms