Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.28■□□□□ 0.68
Krt39Q6IFX4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Mir2861-201ENSMUST00000175539 82 ntBASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt39Q6IFX4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt39Q6IFX4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Gm13148-201ENSMUST00000118892 745 ntBASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt39Q6IFX4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt39Q6IFX4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Gm13401-201ENSMUST00000117074 291 ntBASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.24■□□□□ 0.67
Krt39Q6IFX4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.24■□□□□ 0.67
Krt39Q6IFX4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms