Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Col11a2Q64739 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col11a2Q64739 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.18■□□□□ 0.98
Col11a2Q64739 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col11a2Q64739 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col11a2Q64739 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.18■□□□□ 0.98
Col11a2Q64739 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.18■□□□□ 0.98
Col11a2Q64739 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col11a2Q64739 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col11a2Q64739 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.17■□□□□ 0.98
Col11a2Q64739 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Col11a2Q64739 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.17■□□□□ 0.98
Col11a2Q64739 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col11a2Q64739 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.16■□□□□ 0.98
Col11a2Q64739 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col11a2Q64739 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.15■□□□□ 0.98
Col11a2Q64739 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.15■□□□□ 0.98
Col11a2Q64739 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.15■□□□□ 0.98
Col11a2Q64739 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col11a2Q64739 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Col11a2Q64739 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.15■□□□□ 0.98
Col11a2Q64739 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Mir5131-201ENSMUST00000175426 93 ntBASIC21.15■□□□□ 0.98
Col11a2Q64739 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col11a2Q64739 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Col11a2Q64739 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.14■□□□□ 0.98
Col11a2Q64739 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col11a2Q64739 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col11a2Q64739 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col11a2Q64739 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.14■□□□□ 0.97
Col11a2Q64739 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.14■□□□□ 0.97
Col11a2Q64739 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.14■□□□□ 0.97
Col11a2Q64739 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Col11a2Q64739 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col11a2Q64739 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Col11a2Q64739 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col11a2Q64739 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col11a2Q64739 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col11a2Q64739 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col11a2Q64739 Mir5126-201ENSMUST00000175513 77 ntBASIC21.13■□□□□ 0.97
Col11a2Q64739 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Col11a2Q64739 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col11a2Q64739 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.12■□□□□ 0.97
Col11a2Q64739 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Col11a2Q64739 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Phf7-203ENSMUST00000226565 1971 ntBASIC21.12■□□□□ 0.97
Col11a2Q64739 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.12■□□□□ 0.97
Col11a2Q64739 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Gm18195-201ENSMUST00000207604 706 ntBASIC21.12■□□□□ 0.97
Col11a2Q64739 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col11a2Q64739 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.12■□□□□ 0.97
Col11a2Q64739 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Col11a2Q64739 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.11■□□□□ 0.97
Col11a2Q64739 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.11■□□□□ 0.97
Col11a2Q64739 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col11a2Q64739 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Col11a2Q64739 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms