Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Notch3Q61982 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.36□□□□□ -0.27
Notch3Q61982 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.36□□□□□ -0.27
Notch3Q61982 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Notch3Q61982 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.36□□□□□ -0.27
Notch3Q61982 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Notch3Q61982 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Notch3Q61982 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.35□□□□□ -0.27
Notch3Q61982 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Notch3Q61982 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.35□□□□□ -0.27
Notch3Q61982 Gm45058-201ENSMUST00000205810 766 ntBASIC13.35□□□□□ -0.27
Notch3Q61982 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Notch3Q61982 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.34□□□□□ -0.27
Notch3Q61982 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Notch3Q61982 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Notch3Q61982 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Notch3Q61982 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Notch3Q61982 Grk6-206ENSMUST00000224995 2971 ntBASIC13.34□□□□□ -0.27
Notch3Q61982 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Notch3Q61982 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Notch3Q61982 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Notch3Q61982 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Notch3Q61982 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Notch3Q61982 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Notch3Q61982 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Notch3Q61982 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Notch3Q61982 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Notch3Q61982 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.33□□□□□ -0.28
Notch3Q61982 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.33□□□□□ -0.28
Notch3Q61982 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Notch3Q61982 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Notch3Q61982 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Notch3Q61982 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.32□□□□□ -0.28
Notch3Q61982 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Notch3Q61982 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Notch3Q61982 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms