Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rai1Q61818 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rai1Q61818 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rai1Q61818 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rai1Q61818 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rai1Q61818 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.81■□□□□ 0.28
Rai1Q61818 Gm27742-201ENSMUST00000184667 60 ntBASIC16.81■□□□□ 0.28
Rai1Q61818 Gm18115-201ENSMUST00000221209 621 ntBASIC16.81■□□□□ 0.28
Rai1Q61818 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rai1Q61818 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rai1Q61818 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.81■□□□□ 0.28
Rai1Q61818 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rai1Q61818 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rai1Q61818 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rai1Q61818 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rai1Q61818 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rai1Q61818 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rai1Q61818 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rai1Q61818 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rai1Q61818 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.78■□□□□ 0.28
Rai1Q61818 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.78■□□□□ 0.28
Rai1Q61818 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rai1Q61818 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.78■□□□□ 0.28
Rai1Q61818 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Grk6-206ENSMUST00000224995 2971 ntBASIC16.78■□□□□ 0.28
Rai1Q61818 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rai1Q61818 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.78■□□□□ 0.28
Rai1Q61818 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.78■□□□□ 0.28
Rai1Q61818 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.77■□□□□ 0.28
Rai1Q61818 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.77■□□□□ 0.28
Rai1Q61818 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rai1Q61818 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rai1Q61818 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rai1Q61818 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.77■□□□□ 0.27
Rai1Q61818 Mzt1-203ENSMUST00000227948 952 ntBASIC16.77■□□□□ 0.27
Rai1Q61818 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rai1Q61818 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rai1Q61818 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rai1Q61818 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rai1Q61818 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.76■□□□□ 0.27
Rai1Q61818 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Gm6623-201ENSMUST00000173570 544 ntBASIC16.76■□□□□ 0.27
Rai1Q61818 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.76■□□□□ 0.27
Rai1Q61818 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rai1Q61818 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
Rai1Q61818 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms