Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Clcn4Q61418 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Gm37856-201ENSMUST00000191634 999 ntBASIC16.06■□□□□ 0.16
Clcn4Q61418 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.06■□□□□ 0.16
Clcn4Q61418 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.06■□□□□ 0.16
Clcn4Q61418 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Gm10812-201ENSMUST00000099864 546 ntBASIC16.05■□□□□ 0.16
Clcn4Q61418 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcn4Q61418 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcn4Q61418 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.04■□□□□ 0.16
Clcn4Q61418 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Clcn4Q61418 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcn4Q61418 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn4Q61418 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Clcn4Q61418 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn4Q61418 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn4Q61418 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Clcn4Q61418 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Clcn4Q61418 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms