Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.43■□□□□ 0.06
Traf4Q61382 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.43■□□□□ 0.06
Traf4Q61382 Mir1199-201ENSMUST00000117015 119 ntBASIC15.43■□□□□ 0.06
Traf4Q61382 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.43■□□□□ 0.06
Traf4Q61382 Gm22325-201ENSMUST00000158904 308 ntBASIC15.43■□□□□ 0.06
Traf4Q61382 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Traf4Q61382 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.43■□□□□ 0.06
Traf4Q61382 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.43■□□□□ 0.06
Traf4Q61382 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.43■□□□□ 0.06
Traf4Q61382 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Traf4Q61382 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Traf4Q61382 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.42■□□□□ 0.06
Traf4Q61382 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Traf4Q61382 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Traf4Q61382 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Traf4Q61382 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Traf4Q61382 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.41■□□□□ 0.06
Traf4Q61382 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.41■□□□□ 0.06
Traf4Q61382 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.41■□□□□ 0.06
Traf4Q61382 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.41■□□□□ 0.06
Traf4Q61382 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Traf4Q61382 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Traf4Q61382 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Traf4Q61382 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Traf4Q61382 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Traf4Q61382 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Traf4Q61382 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.39■□□□□ 0.05
Traf4Q61382 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.39■□□□□ 0.05
Traf4Q61382 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Traf4Q61382 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.39■□□□□ 0.05
Traf4Q61382 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Traf4Q61382 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Traf4Q61382 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms