Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm26039-201ENSMUST00000158152 144 ntBASIC17.13■□□□□ 0.33
Cacna1eQ61290 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.13■□□□□ 0.33
Cacna1eQ61290 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.13■□□□□ 0.33
Cacna1eQ61290 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cacna1eQ61290 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1eQ61290 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.12■□□□□ 0.33
Cacna1eQ61290 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacna1eQ61290 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.12■□□□□ 0.33
Cacna1eQ61290 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.12■□□□□ 0.33
Cacna1eQ61290 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1eQ61290 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Mir770-201ENSMUST00000103252 94 ntBASIC17.11■□□□□ 0.33
Cacna1eQ61290 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1eQ61290 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1eQ61290 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1eQ61290 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.1■□□□□ 0.33
Cacna1eQ61290 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.1■□□□□ 0.33
Cacna1eQ61290 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.1■□□□□ 0.33
Cacna1eQ61290 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1eQ61290 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.09■□□□□ 0.33
Cacna1eQ61290 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.09■□□□□ 0.33
Cacna1eQ61290 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.09■□□□□ 0.33
Cacna1eQ61290 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.09■□□□□ 0.33
Cacna1eQ61290 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1eQ61290 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cacna1eQ61290 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Gm34391-201ENSMUST00000203706 907 ntBASIC17.08■□□□□ 0.32
Cacna1eQ61290 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Cacna1eQ61290 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms