Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Col11a1Q61245 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.57■□□□□ 0.72
Col11a1Q61245 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col11a1Q61245 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col11a1Q61245 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.57■□□□□ 0.72
Col11a1Q61245 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col11a1Q61245 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a1Q61245 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col11a1Q61245 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.56■□□□□ 0.72
Col11a1Q61245 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 Gm18195-201ENSMUST00000207604 706 ntBASIC19.56■□□□□ 0.72
Col11a1Q61245 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col11a1Q61245 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a1Q61245 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col11a1Q61245 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.55■□□□□ 0.72
Col11a1Q61245 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a1Q61245 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Col11a1Q61245 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Col11a1Q61245 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Golph3-205ENSMUST00000228671 2842 ntBASIC19.54■□□□□ 0.72
Col11a1Q61245 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a1Q61245 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a1Q61245 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.53■□□□□ 0.72
Col11a1Q61245 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a1Q61245 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col11a1Q61245 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col11a1Q61245 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a1Q61245 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a1Q61245 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.53■□□□□ 0.72
Col11a1Q61245 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.53■□□□□ 0.72
Col11a1Q61245 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.53■□□□□ 0.72
Col11a1Q61245 Gm18421-201ENSMUST00000204122 625 ntBASIC19.53■□□□□ 0.72
Col11a1Q61245 Phf7-203ENSMUST00000226565 1971 ntBASIC19.52■□□□□ 0.72
Col11a1Q61245 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.52■□□□□ 0.72
Col11a1Q61245 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col11a1Q61245 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col11a1Q61245 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col11a1Q61245 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col11a1Q61245 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Col11a1Q61245 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Col11a1Q61245 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Col11a1Q61245 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Mir5131-201ENSMUST00000175426 93 ntBASIC19.51■□□□□ 0.71
Col11a1Q61245 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.51■□□□□ 0.71
Col11a1Q61245 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Col11a1Q61245 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Col11a1Q61245 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.51■□□□□ 0.71
Col11a1Q61245 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col11a1Q61245 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.51■□□□□ 0.71
Col11a1Q61245 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms