Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sdf4Q61112 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.69■□□□□ 0.42
Sdf4Q61112 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Sdf4Q61112 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sdf4Q61112 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdf4Q61112 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.67■□□□□ 0.42
Sdf4Q61112 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.67■□□□□ 0.42
Sdf4Q61112 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.67■□□□□ 0.42
Sdf4Q61112 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Sdf4Q61112 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdf4Q61112 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdf4Q61112 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.66■□□□□ 0.42
Sdf4Q61112 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.66■□□□□ 0.42
Sdf4Q61112 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdf4Q61112 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sdf4Q61112 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
Sdf4Q61112 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Gm22240-201ENSMUST00000175225 82 ntBASIC17.65■□□□□ 0.42
Sdf4Q61112 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sdf4Q61112 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.65■□□□□ 0.42
Sdf4Q61112 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.65■□□□□ 0.42
Sdf4Q61112 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdf4Q61112 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdf4Q61112 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Sdf4Q61112 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.64■□□□□ 0.41
Sdf4Q61112 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sdf4Q61112 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Gm4974-201ENSMUST00000209974 875 ntBASIC17.64■□□□□ 0.41
Sdf4Q61112 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdf4Q61112 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sdf4Q61112 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms