Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Gm8495-201ENSMUST00000188740 694 ntBASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Gm38285-201ENSMUST00000192928 922 ntBASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7d-3Q5R1I1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Flg-201ENSMUST00000050758 1488 ntBASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Gm44549-201ENSMUST00000208351 577 ntBASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7d-3Q5R1I1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Idnk-204ENSMUST00000226010 1898 ntBASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Gm26571-201ENSMUST00000181399 666 ntBASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.79□□□□□ -0.36
Trav7d-3Q5R1I1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms