Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Gm6433-201ENSMUST00000118634 875 ntBASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Gm13559-201ENSMUST00000120476 863 ntBASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Gm27463-201ENSMUST00000183569 57 ntBASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.65□□□□□ -0.06
Trav6d-4Q5R1I0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav6d-4Q5R1I0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Gm9987-201ENSMUST00000069768 567 ntBASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav6d-4Q5R1I0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-4Q5R1I0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms