Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Gm26571-201ENSMUST00000181399 666 ntBASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav8d-1Q5R1H8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-1Q5R1H8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav8d-1Q5R1H8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav8d-1Q5R1H8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms