Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Gm20049-201ENSMUST00000219950 730 ntBASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Gm15375-201ENSMUST00000119510 849 ntBASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Mir6349-201ENSMUST00000184059 97 ntBASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5d-4Q5R1F6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5d-4Q5R1F6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Gm13158-201ENSMUST00000122007 736 ntBASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Trav5d-4Q5R1F6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5d-4Q5R1F6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms