Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Gm18958-201ENSMUST00000174258 762 ntBASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx49Q4FZF3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Gm27357-201ENSMUST00000183754 135 ntBASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx49Q4FZF3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx49Q4FZF3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Gm10566-201ENSMUST00000086739 996 ntBASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.17■□□□□ 0.82
Ddx49Q4FZF3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm24589-201ENSMUST00000116692 94 ntBASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm26039-201ENSMUST00000158152 144 ntBASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm37025-201ENSMUST00000195159 829 ntBASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx49Q4FZF3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms