Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC051142Q3V0M8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.63■□□□□ 0.57
BC051142Q3V0M8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BC051142Q3V0M8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC051142Q3V0M8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC051142Q3V0M8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC051142Q3V0M8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC051142Q3V0M8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms