Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Gm10493-201ENSMUST00000097270 612 ntBASIC17.16■□□□□ 0.34
Tmed1Q3V009 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmed1Q3V009 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmed1Q3V009 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Tmed1Q3V009 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Gm42778-201ENSMUST00000199644 553 ntBASIC17.14■□□□□ 0.33
Tmed1Q3V009 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmed1Q3V009 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmed1Q3V009 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tmed1Q3V009 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.12■□□□□ 0.33
Tmed1Q3V009 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmed1Q3V009 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmed1Q3V009 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tmed1Q3V009 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tmed1Q3V009 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms