Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.74■□□□□ 0.43
Foxr1Q3UTB7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxr1Q3UTB7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Gm7370-201ENSMUST00000219471 767 ntBASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxr1Q3UTB7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxr1Q3UTB7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxr1Q3UTB7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxr1Q3UTB7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxr1Q3UTB7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxr1Q3UTB7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxr1Q3UTB7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms