Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm33142-201ENSMUST00000193913 867 ntBASIC17.5■□□□□ 0.39
Usp30Q3UN04 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp30Q3UN04 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.49■□□□□ 0.39
Usp30Q3UN04 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Gm27389-201ENSMUST00000183622 195 ntBASIC17.49■□□□□ 0.39
Usp30Q3UN04 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.49■□□□□ 0.39
Usp30Q3UN04 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp30Q3UN04 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp30Q3UN04 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gm21559-201ENSMUST00000220638 855 ntBASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gm8587-201ENSMUST00000076538 843 ntBASIC17.47■□□□□ 0.39
Usp30Q3UN04 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp30Q3UN04 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Idnk-204ENSMUST00000226010 1898 ntBASIC17.46■□□□□ 0.39
Usp30Q3UN04 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Mir8112-201ENSMUST00000184382 131 ntBASIC17.46■□□□□ 0.39
Usp30Q3UN04 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.46■□□□□ 0.39
Usp30Q3UN04 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp30Q3UN04 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms