Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Gm17808-201ENSMUST00000200859 894 ntBASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Gm21559-201ENSMUST00000220638 855 ntBASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Gm8587-201ENSMUST00000076538 843 ntBASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnrc6aQ3UHK8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gm27389-201ENSMUST00000183622 195 ntBASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gm27357-201ENSMUST00000183754 135 ntBASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gm10566-201ENSMUST00000086739 996 ntBASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnrc6aQ3UHK8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Gm7213-201ENSMUST00000215977 950 ntBASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tnrc6aQ3UHK8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Gm11950-201ENSMUST00000121615 838 ntBASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnrc6aQ3UHK8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnrc6aQ3UHK8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnrc6aQ3UHK8 Gm18669-201ENSMUST00000216049 778 ntBASIC16.1■□□□□ 0.17
Tnrc6aQ3UHK8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnrc6aQ3UHK8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnrc6aQ3UHK8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms