Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.57■□□□□ 0.88
Rnf180Q3U827 Gm15173-201ENSMUST00000122049 433 ntBASIC20.57■□□□□ 0.88
Rnf180Q3U827 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf180Q3U827 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Rnf180Q3U827 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf180Q3U827 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Mir6956-201ENSMUST00000183598 62 ntBASIC20.56■□□□□ 0.88
Rnf180Q3U827 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 AV026068-213ENSMUST00000223675 1171 ntBASIC20.56■□□□□ 0.88
Rnf180Q3U827 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf180Q3U827 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rnf180Q3U827 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf180Q3U827 Arhgef33-209ENSMUST00000225223 714 ntBASIC20.55■□□□□ 0.88
Rnf180Q3U827 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf180Q3U827 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf180Q3U827 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf180Q3U827 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.54■□□□□ 0.88
Rnf180Q3U827 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Gm29791-202ENSMUST00000207888 369 ntBASIC20.54■□□□□ 0.88
Rnf180Q3U827 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.54■□□□□ 0.88
Rnf180Q3U827 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf180Q3U827 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.53■□□□□ 0.88
Rnf180Q3U827 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rnf180Q3U827 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.53■□□□□ 0.88
Rnf180Q3U827 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rnf180Q3U827 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rnf180Q3U827 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rnf180Q3U827 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Rnf180Q3U827 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf180Q3U827 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.51■□□□□ 0.87
Rnf180Q3U827 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf180Q3U827 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Rnf180Q3U827 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.5■□□□□ 0.87
Rnf180Q3U827 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.5■□□□□ 0.87
Rnf180Q3U827 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms