Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.48□□□□□ -0.09
Trim63Q38HM4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.48□□□□□ -0.09
Trim63Q38HM4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim63Q38HM4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.46□□□□□ -0.09
Trim63Q38HM4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.46□□□□□ -0.09
Trim63Q38HM4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Gm6311-201ENSMUST00000073790 878 ntBASIC14.46□□□□□ -0.09
Trim63Q38HM4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim63Q38HM4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim63Q38HM4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.45□□□□□ -0.1
Trim63Q38HM4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim63Q38HM4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms