Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.12■□□□□ 0.17
Lrfn1Q2WF71 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Gm10849-201ENSMUST00000100397 618 ntBASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrfn1Q2WF71 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Gm13234-201ENSMUST00000120010 747 ntBASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrfn1Q2WF71 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 AV356131-201ENSMUST00000206201 750 ntBASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrfn1Q2WF71 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrfn1Q2WF71 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Gm7291-201ENSMUST00000199147 382 ntBASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Lrfn1Q2WF71 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrfn1Q2WF71 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.07■□□□□ 0.16
Lrfn1Q2WF71 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrfn1Q2WF71 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrfn1Q2WF71 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.07■□□□□ 0.16
Lrfn1Q2WF71 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms