Protein–RNA interactions for Protein: Q2KN98

Specc1l, Cytospin-A, mousemouse

Known RBP Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Specc1lQ2KN98 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Specc1lQ2KN98 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Specc1lQ2KN98 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Specc1lQ2KN98 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Specc1lQ2KN98 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.22■□□□□ 0.67
Specc1lQ2KN98 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.22■□□□□ 0.67
Specc1lQ2KN98 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Specc1lQ2KN98 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Specc1lQ2KN98 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Gm38285-201ENSMUST00000192928 922 ntBASIC19.2■□□□□ 0.66
Specc1lQ2KN98 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Specc1lQ2KN98 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Specc1lQ2KN98 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Specc1lQ2KN98 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Specc1lQ2KN98 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms