Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crnkl1P63154 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crnkl1P63154 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Gm7860-201ENSMUST00000121190 879 ntBASIC17.25■□□□□ 0.35
Crnkl1P63154 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Crnkl1P63154 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Crnkl1P63154 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crnkl1P63154 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Reep4-203ENSMUST00000226563 1444 ntBASIC17.24■□□□□ 0.35
Crnkl1P63154 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.24■□□□□ 0.35
Crnkl1P63154 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.24■□□□□ 0.35
Crnkl1P63154 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.24■□□□□ 0.35
Crnkl1P63154 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.24■□□□□ 0.35
Crnkl1P63154 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Crnkl1P63154 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crnkl1P63154 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.23■□□□□ 0.35
Crnkl1P63154 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Crnkl1P63154 Gm13234-201ENSMUST00000120010 747 ntBASIC17.23■□□□□ 0.35
Crnkl1P63154 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Crnkl1P63154 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Gm42569-201ENSMUST00000200539 472 ntBASIC17.23■□□□□ 0.35
Crnkl1P63154 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Crnkl1P63154 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Crnkl1P63154 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crnkl1P63154 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Crnkl1P63154 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.22■□□□□ 0.35
Crnkl1P63154 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.22■□□□□ 0.35
Crnkl1P63154 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Crnkl1P63154 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.22■□□□□ 0.35
Crnkl1P63154 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Crnkl1P63154 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crnkl1P63154 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Crnkl1P63154 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.21■□□□□ 0.35
Crnkl1P63154 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Crnkl1P63154 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Crnkl1P63154 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.21■□□□□ 0.34
Crnkl1P63154 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Crnkl1P63154 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms