Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vamp3P63024 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Vamp3P63024 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.48□□□□□ -0.25
Vamp3P63024 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vamp3P63024 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.47□□□□□ -0.25
Vamp3P63024 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Vamp3P63024 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vamp3P63024 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.47□□□□□ -0.25
Vamp3P63024 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Vamp3P63024 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vamp3P63024 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vamp3P63024 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vamp3P63024 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.46□□□□□ -0.25
Vamp3P63024 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vamp3P63024 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vamp3P63024 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vamp3P63024 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vamp3P63024 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vamp3P63024 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vamp3P63024 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.45□□□□□ -0.26
Vamp3P63024 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.45□□□□□ -0.26
Vamp3P63024 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vamp3P63024 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vamp3P63024 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vamp3P63024 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.44□□□□□ -0.26
Vamp3P63024 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Gm7143-201ENSMUST00000222811 859 ntBASIC13.44□□□□□ -0.26
Vamp3P63024 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vamp3P63024 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vamp3P63024 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.44□□□□□ -0.26
Vamp3P63024 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.43□□□□□ -0.26
Vamp3P63024 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vamp3P63024 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms