Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pfn1P62962 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Pfn1P62962 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pfn1P62962 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Pfn1P62962 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.54□□□□□ -0.24
Pfn1P62962 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.54□□□□□ -0.24
Pfn1P62962 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pfn1P62962 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfn1P62962 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pfn1P62962 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.53□□□□□ -0.24
Pfn1P62962 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.53□□□□□ -0.24
Pfn1P62962 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pfn1P62962 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfn1P62962 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfn1P62962 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pfn1P62962 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfn1P62962 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.52□□□□□ -0.25
Pfn1P62962 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfn1P62962 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pfn1P62962 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.51□□□□□ -0.25
Pfn1P62962 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pfn1P62962 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pfn1P62962 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.51□□□□□ -0.25
Pfn1P62962 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.51□□□□□ -0.25
Pfn1P62962 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.51□□□□□ -0.25
Pfn1P62962 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Pfn1P62962 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pfn1P62962 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pfn1P62962 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfn1P62962 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms