Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.11□□□□□ -0.15
Lmo4P61969 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.11□□□□□ -0.15
Lmo4P61969 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Lmo4P61969 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lmo4P61969 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lmo4P61969 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Gm5587-201ENSMUST00000206270 674 ntBASIC14.1□□□□□ -0.15
Lmo4P61969 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lmo4P61969 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lmo4P61969 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lmo4P61969 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lmo4P61969 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.1□□□□□ -0.15
Lmo4P61969 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.09□□□□□ -0.15
Lmo4P61969 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Lmo4P61969 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lmo4P61969 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lmo4P61969 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Gm9013-201ENSMUST00000132939 882 ntBASIC14.09□□□□□ -0.15
Lmo4P61969 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.09□□□□□ -0.15
Lmo4P61969 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.09□□□□□ -0.15
Lmo4P61969 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lmo4P61969 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lmo4P61969 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.08□□□□□ -0.15
Lmo4P61969 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lmo4P61969 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Lmo4P61969 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.08□□□□□ -0.16
Lmo4P61969 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.08□□□□□ -0.16
Lmo4P61969 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.08□□□□□ -0.16
Lmo4P61969 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lmo4P61969 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lmo4P61969 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lmo4P61969 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.07□□□□□ -0.16
Lmo4P61969 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.07□□□□□ -0.16
Lmo4P61969 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Gm10566-201ENSMUST00000086739 996 ntBASIC14.07□□□□□ -0.16
Lmo4P61969 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.07□□□□□ -0.16
Lmo4P61969 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lmo4P61969 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.06□□□□□ -0.16
Lmo4P61969 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Lmo4P61969 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Gm14859-201ENSMUST00000117752 357 ntBASIC14.06□□□□□ -0.16
Lmo4P61969 Gm11355-201ENSMUST00000121120 306 ntBASIC14.06□□□□□ -0.16
Lmo4P61969 Gm26039-201ENSMUST00000158152 144 ntBASIC14.06□□□□□ -0.16
Lmo4P61969 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Lmo4P61969 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms