Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.75■□□□□ 0.75
Usp25P57080 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.75■□□□□ 0.75
Usp25P57080 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp25P57080 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp25P57080 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Usp25P57080 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp25P57080 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp25P57080 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp25P57080 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp25P57080 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.74■□□□□ 0.75
Usp25P57080 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.73■□□□□ 0.75
Usp25P57080 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp25P57080 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp25P57080 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp25P57080 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp25P57080 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp25P57080 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usp25P57080 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Gm29791-202ENSMUST00000207888 369 ntBASIC19.71■□□□□ 0.75
Usp25P57080 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp25P57080 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp25P57080 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp25P57080 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp25P57080 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.7■□□□□ 0.74
Usp25P57080 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Usp25P57080 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.7■□□□□ 0.74
Usp25P57080 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp25P57080 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp25P57080 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp25P57080 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp25P57080 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp25P57080 Gm13216-201ENSMUST00000117145 591 ntBASIC19.69■□□□□ 0.74
Usp25P57080 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp25P57080 Gm8495-201ENSMUST00000188740 694 ntBASIC19.69■□□□□ 0.74
Usp25P57080 Gm10033-202ENSMUST00000211874 928 ntBASIC19.69■□□□□ 0.74
Usp25P57080 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp25P57080 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.69■□□□□ 0.74
Usp25P57080 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp25P57080 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp25P57080 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp25P57080 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp25P57080 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Usp25P57080 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.68■□□□□ 0.74
Usp25P57080 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp25P57080 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms