Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Haglr-201ENSMUST00000100000 2085 ntBASIC14.48□□□□□ -0.09
Nkx2-1P50220 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-1P50220 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-1P50220 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.46□□□□□ -0.09
Nkx2-1P50220 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-1P50220 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-1P50220 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-1P50220 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.44□□□□□ -0.1
Nkx2-1P50220 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-1P50220 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms