Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.56■□□□□ 0.72
Sdc2P43407 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.56■□□□□ 0.72
Sdc2P43407 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.56■□□□□ 0.72
Sdc2P43407 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sdc2P43407 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sdc2P43407 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sdc2P43407 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
Sdc2P43407 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.55■□□□□ 0.72
Sdc2P43407 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.55■□□□□ 0.72
Sdc2P43407 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sdc2P43407 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sdc2P43407 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sdc2P43407 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc2P43407 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sdc2P43407 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sdc2P43407 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Sdc2P43407 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sdc2P43407 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sdc2P43407 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.54■□□□□ 0.72
Sdc2P43407 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Sdc2P43407 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc2P43407 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.53■□□□□ 0.72
Sdc2P43407 Gm13401-201ENSMUST00000117074 291 ntBASIC19.53■□□□□ 0.72
Sdc2P43407 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.53■□□□□ 0.72
Sdc2P43407 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.53■□□□□ 0.72
Sdc2P43407 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc2P43407 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sdc2P43407 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Sdc2P43407 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.52■□□□□ 0.72
Sdc2P43407 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Gm2559-201ENSMUST00000201323 363 ntBASIC19.52■□□□□ 0.72
Sdc2P43407 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sdc2P43407 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sdc2P43407 Gm4968-201ENSMUST00000071458 858 ntBASIC19.52■□□□□ 0.72
Sdc2P43407 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.52■□□□□ 0.72
Sdc2P43407 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc2P43407 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Sdc2P43407 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.52■□□□□ 0.71
Sdc2P43407 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Sdc2P43407 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.52■□□□□ 0.71
Sdc2P43407 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sdc2P43407 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sdc2P43407 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sdc2P43407 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Sdc2P43407 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.51■□□□□ 0.71
Sdc2P43407 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms