Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.12■□□□□ 0.17
Foxa1P35582 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.12■□□□□ 0.17
Foxa1P35582 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.12■□□□□ 0.17
Foxa1P35582 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Foxa1P35582 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.12■□□□□ 0.17
Foxa1P35582 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
Foxa1P35582 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Foxa1P35582 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.11■□□□□ 0.17
Foxa1P35582 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.11■□□□□ 0.17
Foxa1P35582 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.11■□□□□ 0.17
Foxa1P35582 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Foxa1P35582 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Foxa1P35582 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.11■□□□□ 0.17
Foxa1P35582 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa1P35582 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.1■□□□□ 0.17
Foxa1P35582 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.1■□□□□ 0.17
Foxa1P35582 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.1■□□□□ 0.17
Foxa1P35582 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Foxa1P35582 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa1P35582 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.09■□□□□ 0.17
Foxa1P35582 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.09■□□□□ 0.17
Foxa1P35582 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.09■□□□□ 0.17
Foxa1P35582 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Foxa1P35582 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Foxa1P35582 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa1P35582 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Foxa1P35582 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxa1P35582 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Foxa1P35582 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxa1P35582 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.08■□□□□ 0.17
Foxa1P35582 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Foxa1P35582 Gm715-201ENSMUST00000117865 831 ntBASIC16.08■□□□□ 0.16
Foxa1P35582 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.08■□□□□ 0.16
Foxa1P35582 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Foxa1P35582 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa1P35582 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.07■□□□□ 0.16
Foxa1P35582 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxa1P35582 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxa1P35582 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.07■□□□□ 0.16
Foxa1P35582 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Foxa1P35582 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms