Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.32■□□□□ 0.36
Nckap1P28660 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Gm21362-201ENSMUST00000194272 928 ntBASIC17.32■□□□□ 0.36
Nckap1P28660 Gm37025-201ENSMUST00000195159 829 ntBASIC17.32■□□□□ 0.36
Nckap1P28660 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.32■□□□□ 0.36
Nckap1P28660 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nckap1P28660 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nckap1P28660 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nckap1P28660 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nckap1P28660 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nckap1P28660 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 AA414768-201ENSMUST00000121924 1257 ntBASIC17.31■□□□□ 0.36
Nckap1P28660 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.31■□□□□ 0.36
Nckap1P28660 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.31■□□□□ 0.36
Nckap1P28660 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Nckap1P28660 Gm7791-201ENSMUST00000219066 539 ntBASIC17.31■□□□□ 0.36
Nckap1P28660 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Gm7367-201ENSMUST00000057611 492 ntBASIC17.31■□□□□ 0.36
Nckap1P28660 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nckap1P28660 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nckap1P28660 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nckap1P28660 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nckap1P28660 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nckap1P28660 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.3■□□□□ 0.36
Nckap1P28660 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.3■□□□□ 0.36
Nckap1P28660 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.3■□□□□ 0.36
Nckap1P28660 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nckap1P28660 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.3■□□□□ 0.36
Nckap1P28660 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nckap1P28660 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.29■□□□□ 0.36
Nckap1P28660 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.29■□□□□ 0.36
Nckap1P28660 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Nckap1P28660 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nckap1P28660 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.28■□□□□ 0.36
Nckap1P28660 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nckap1P28660 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nckap1P28660 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
Nckap1P28660 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.28■□□□□ 0.36
Nckap1P28660 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nckap1P28660 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms