Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gjb1P28230 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gjb1P28230 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gjb1P28230 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.44■□□□□ 0.7
Gjb1P28230 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.44■□□□□ 0.7
Gjb1P28230 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gjb1P28230 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gjb1P28230 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.43■□□□□ 0.7
Gjb1P28230 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.43■□□□□ 0.7
Gjb1P28230 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gjb1P28230 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gjb1P28230 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm10418-201ENSMUST00000100943 576 ntBASIC19.42■□□□□ 0.7
Gjb1P28230 Gm12895-201ENSMUST00000122214 226 ntBASIC19.42■□□□□ 0.7
Gjb1P28230 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm10052-201ENSMUST00000168019 960 ntBASIC19.42■□□□□ 0.7
Gjb1P28230 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm7729-201ENSMUST00000050143 801 ntBASIC19.42■□□□□ 0.7
Gjb1P28230 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gjb1P28230 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.42■□□□□ 0.7
Gjb1P28230 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gjb1P28230 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gjb1P28230 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gjb1P28230 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gjb1P28230 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.41■□□□□ 0.7
Gjb1P28230 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gjb1P28230 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.41■□□□□ 0.7
Gjb1P28230 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gjb1P28230 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gjb1P28230 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Gjb1P28230 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.4■□□□□ 0.7
Gjb1P28230 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.4■□□□□ 0.7
Gjb1P28230 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.4■□□□□ 0.7
Gjb1P28230 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gjb1P28230 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gjb1P28230 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Gjb1P28230 Gm15794-201ENSMUST00000120182 631 ntBASIC19.39■□□□□ 0.69
Gjb1P28230 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.39■□□□□ 0.69
Gjb1P28230 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.39■□□□□ 0.69
Gjb1P28230 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gjb1P28230 Actl10-202ENSMUST00000226583 1501 ntBASIC19.39■□□□□ 0.69
Gjb1P28230 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gjb1P28230 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Gjb1P28230 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gjb1P28230 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gjb1P28230 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gjb1P28230 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gjb1P28230 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gjb1P28230 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms