Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.78■□□□□ 0.12
Cd40P27512 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Gm24841-201ENSMUST00000158676 357 ntBASIC15.78■□□□□ 0.12
Cd40P27512 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.78■□□□□ 0.12
Cd40P27512 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.78■□□□□ 0.12
Cd40P27512 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Cd40P27512 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.78■□□□□ 0.12
Cd40P27512 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.78■□□□□ 0.12
Cd40P27512 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cd40P27512 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.77■□□□□ 0.12
Cd40P27512 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cd40P27512 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Cd40P27512 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.77■□□□□ 0.12
Cd40P27512 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Cd40P27512 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.77■□□□□ 0.12
Cd40P27512 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.77■□□□□ 0.12
Cd40P27512 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd40P27512 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cd40P27512 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.77■□□□□ 0.11
Cd40P27512 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.77■□□□□ 0.11
Cd40P27512 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.76■□□□□ 0.11
Cd40P27512 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Gm715-201ENSMUST00000117865 831 ntBASIC15.76■□□□□ 0.11
Cd40P27512 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd40P27512 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cd40P27512 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cd40P27512 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.75■□□□□ 0.11
Cd40P27512 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.75■□□□□ 0.11
Cd40P27512 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.75■□□□□ 0.11
Cd40P27512 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cd40P27512 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cd40P27512 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.75■□□□□ 0.11
Cd40P27512 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd40P27512 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cd40P27512 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.74■□□□□ 0.11
Cd40P27512 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Cd40P27512 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.74■□□□□ 0.11
Cd40P27512 Timm23-208ENSMUST00000226683 750 ntBASIC15.74■□□□□ 0.11
Cd40P27512 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cd40P27512 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cd40P27512 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cd40P27512 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cd40P27512 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms