Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SnrpbP27048 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SnrpbP27048 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.32■□□□□ 0.04
SnrpbP27048 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SnrpbP27048 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SnrpbP27048 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SnrpbP27048 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SnrpbP27048 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SnrpbP27048 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SnrpbP27048 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SnrpbP27048 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SnrpbP27048 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.31■□□□□ 0.04
SnrpbP27048 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SnrpbP27048 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.31■□□□□ 0.04
SnrpbP27048 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SnrpbP27048 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SnrpbP27048 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SnrpbP27048 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.3■□□□□ 0.04
SnrpbP27048 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC15.3■□□□□ 0.04
SnrpbP27048 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Trmt13-210ENSMUST00000198454 880 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Reep4-203ENSMUST00000226563 1444 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
SnrpbP27048 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SnrpbP27048 Gm9988-201ENSMUST00000069786 435 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Gm6139-201ENSMUST00000079261 882 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SnrpbP27048 Gm13241-201ENSMUST00000094493 780 ntBASIC15.3■□□□□ 0.04
SnrpbP27048 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SnrpbP27048 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.29■□□□□ 0.04
SnrpbP27048 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SnrpbP27048 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SnrpbP27048 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.29■□□□□ 0.04
SnrpbP27048 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.29■□□□□ 0.04
SnrpbP27048 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
SnrpbP27048 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SnrpbP27048 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SnrpbP27048 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SnrpbP27048 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SnrpbP27048 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.28■□□□□ 0.04
SnrpbP27048 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.28■□□□□ 0.04
SnrpbP27048 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms