Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Tpm3P21107 Gm43173-201ENSMUST00000202246 593 ntBASIC19.57■□□□□ 0.72
Tpm3P21107 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.57■□□□□ 0.72
Tpm3P21107 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm3P21107 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.57■□□□□ 0.72
Tpm3P21107 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.56■□□□□ 0.72
Tpm3P21107 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Tpm3P21107 Gm22325-201ENSMUST00000158904 308 ntBASIC19.56■□□□□ 0.72
Tpm3P21107 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Tpm3P21107 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.56■□□□□ 0.72
Tpm3P21107 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.56■□□□□ 0.72
Tpm3P21107 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.56■□□□□ 0.72
Tpm3P21107 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Tpm3P21107 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tpm3P21107 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm3P21107 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tpm3P21107 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Gm38205-201ENSMUST00000192243 258 ntBASIC19.55■□□□□ 0.72
Tpm3P21107 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm3P21107 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpm3P21107 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.54■□□□□ 0.72
Tpm3P21107 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tpm3P21107 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tpm3P21107 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tpm3P21107 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tpm3P21107 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm3P21107 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tpm3P21107 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.53■□□□□ 0.72
Tpm3P21107 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.53■□□□□ 0.72
Tpm3P21107 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tpm3P21107 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Tpm3P21107 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.53■□□□□ 0.72
Tpm3P21107 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm3P21107 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.52■□□□□ 0.72
Tpm3P21107 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.52■□□□□ 0.72
Tpm3P21107 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.52■□□□□ 0.72
Tpm3P21107 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm3P21107 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Tpm3P21107 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms