Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Gm21814-202ENSMUST00000203277 873 ntBASIC14.17□□□□□ -0.14
Tnfrsf9P20334 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf9P20334 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf9P20334 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.15□□□□□ -0.14
Tnfrsf9P20334 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf9P20334 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Tnfrsf9P20334 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Gm42545-201ENSMUST00000202755 922 ntBASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf9P20334 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf9P20334 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.13□□□□□ -0.15
Tnfrsf9P20334 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf9P20334 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf9P20334 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tnfrsf9P20334 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms