Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.04□□□□□ -0.48
Smim1P0C8K7 Gm10232-201ENSMUST00000089221 720 ntBASIC12.04□□□□□ -0.48
Smim1P0C8K7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim1P0C8K7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.03□□□□□ -0.48
Smim1P0C8K7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.03□□□□□ -0.48
Smim1P0C8K7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim1P0C8K7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim1P0C8K7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smim1P0C8K7 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.02□□□□□ -0.48
Smim1P0C8K7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smim1P0C8K7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.02□□□□□ -0.48
Smim1P0C8K7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim1P0C8K7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.02□□□□□ -0.49
Smim1P0C8K7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim1P0C8K7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.01□□□□□ -0.49
Smim1P0C8K7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Smim1P0C8K7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms