Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp6P0C0A3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp6P0C0A3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp6P0C0A3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp6P0C0A3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp6P0C0A3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp6P0C0A3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp6P0C0A3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp6P0C0A3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp6P0C0A3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp6P0C0A3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Chmp6P0C0A3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms