Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.5■■□□□ 1.03
Col4a1P02463 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Col4a1P02463 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a1P02463 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a1P02463 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a1P02463 Gm15794-201ENSMUST00000120182 631 ntBASIC21.49■■□□□ 1.03
Col4a1P02463 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Col4a1P02463 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Col4a1P02463 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.49■■□□□ 1.03
Col4a1P02463 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Col4a1P02463 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.48■■□□□ 1.03
Col4a1P02463 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Col4a1P02463 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.48■■□□□ 1.03
Col4a1P02463 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.48■■□□□ 1.03
Col4a1P02463 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.48■■□□□ 1.03
Col4a1P02463 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.48■■□□□ 1.03
Col4a1P02463 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Col4a1P02463 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col4a1P02463 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Gm7153-201ENSMUST00000117092 455 ntBASIC21.47■■□□□ 1.03
Col4a1P02463 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.47■■□□□ 1.03
Col4a1P02463 Mir3081-201ENSMUST00000175305 84 ntBASIC21.47■■□□□ 1.03
Col4a1P02463 Gm27742-201ENSMUST00000184667 60 ntBASIC21.47■■□□□ 1.03
Col4a1P02463 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Col4a1P02463 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col4a1P02463 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Col4a1P02463 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col4a1P02463 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.46■■□□□ 1.03
Col4a1P02463 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Col4a1P02463 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Col4a1P02463 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
Col4a1P02463 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Col4a1P02463 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Col4a1P02463 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col4a1P02463 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col4a1P02463 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Col4a1P02463 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Gm6623-201ENSMUST00000173570 544 ntBASIC21.44■■□□□ 1.02
Col4a1P02463 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col4a1P02463 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Col4a1P02463 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Col4a1P02463 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.43■■□□□ 1.02
Col4a1P02463 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Col4a1P02463 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col4a1P02463 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms