Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Gm10418-201ENSMUST00000100943 576 ntBASIC17.9■□□□□ 0.46
Syn1O88935 Gm11594-201ENSMUST00000122313 162 ntBASIC17.9■□□□□ 0.46
Syn1O88935 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.9■□□□□ 0.46
Syn1O88935 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.9■□□□□ 0.46
Syn1O88935 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Syn1O88935 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.9■□□□□ 0.46
Syn1O88935 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.89■□□□□ 0.46
Syn1O88935 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Syn1O88935 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syn1O88935 Gm7063-201ENSMUST00000186840 981 ntBASIC17.89■□□□□ 0.45
Syn1O88935 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Syn1O88935 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.89■□□□□ 0.45
Syn1O88935 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syn1O88935 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syn1O88935 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syn1O88935 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Syn1O88935 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Syn1O88935 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Syn1O88935 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.88■□□□□ 0.45
Syn1O88935 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.88■□□□□ 0.45
Syn1O88935 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.88■□□□□ 0.45
Syn1O88935 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Syn1O88935 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syn1O88935 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Syn1O88935 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.87■□□□□ 0.45
Syn1O88935 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Syn1O88935 Gm12895-201ENSMUST00000122214 226 ntBASIC17.87■□□□□ 0.45
Syn1O88935 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.87■□□□□ 0.45
Syn1O88935 Gm9731-201ENSMUST00000209480 747 ntBASIC17.87■□□□□ 0.45
Syn1O88935 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.87■□□□□ 0.45
Syn1O88935 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syn1O88935 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Syn1O88935 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.86■□□□□ 0.45
Syn1O88935 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syn1O88935 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Syn1O88935 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Syn1O88935 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Syn1O88935 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Syn1O88935 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.85■□□□□ 0.45
Syn1O88935 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Gm2213-201ENSMUST00000197485 688 ntBASIC17.85■□□□□ 0.45
Syn1O88935 Gm2651-201ENSMUST00000203560 838 ntBASIC17.85■□□□□ 0.45
Syn1O88935 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Syn1O88935 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Syn1O88935 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syn1O88935 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Syn1O88935 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms