Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.76■□□□□ 0.27
Best1O88870 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Best1O88870 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Best1O88870 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Gm6659-201ENSMUST00000174752 547 ntBASIC16.75■□□□□ 0.27
Best1O88870 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.75■□□□□ 0.27
Best1O88870 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Best1O88870 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.75■□□□□ 0.27
Best1O88870 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Best1O88870 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Best1O88870 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Best1O88870 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.74■□□□□ 0.27
Best1O88870 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Best1O88870 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Mir1668-201ENSMUST00000184114 107 ntBASIC16.74■□□□□ 0.27
Best1O88870 Gm18101-201ENSMUST00000215769 548 ntBASIC16.74■□□□□ 0.27
Best1O88870 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Best1O88870 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Best1O88870 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.73■□□□□ 0.27
Best1O88870 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Best1O88870 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Best1O88870 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Best1O88870 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Best1O88870 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
Best1O88870 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Best1O88870 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Best1O88870 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Best1O88870 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Best1O88870 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Best1O88870 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Best1O88870 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.72■□□□□ 0.27
Best1O88870 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Gm22697-201ENSMUST00000175194 63 ntBASIC16.72■□□□□ 0.27
Best1O88870 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Best1O88870 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Best1O88870 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Best1O88870 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.71■□□□□ 0.27
Best1O88870 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.71■□□□□ 0.27
Best1O88870 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.71■□□□□ 0.27
Best1O88870 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Best1O88870 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.71■□□□□ 0.27
Best1O88870 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Best1O88870 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms